Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase yidc | I596_RS17885 | B8GRD1 | Positive | 4426022 - 4427788 | 64837.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | I596_RS17890 | Q0A4L6 | Positive | 4427850 - 4429193 | 47566.8 |
| duf2380 domain-containing protein | I596_RS18310 | Not Available | Negative | 4429203 - 4429814 | 21789.1 |
| winged helix-turn-helix domain-containing protein | I596_RS17900 | Not Available | Positive | 4430104 - 4432536 | 87309.0 |
| s8 family serine peptidase | I596_RS17905 | Not Available | Positive | 4432901 - 4435828 | 100600.0 |
| ig-like domain-containing protein | I596_RS17910 | Not Available | Positive | 4435889 - 4443088 | 243661.0 |
| winged helix-turn-helix domain-containing protein | I596_RS17915 | Not Available | Positive | 4443329 - 4445731 | 86204.3 |
| hypothetical protein | I596_RS17920 | Not Available | Positive | 4446018 - 4446275 | 8837.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
