Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | I596_RS17835 | B0RLE7 | Negative | 4414842 - 4415258 | 14920.2 |
| mota/tolq/exbb proton channel family protein | I596_RS17840 | B0RLE6 | Negative | 4415262 - 4416044 | 28334.0 |
| energy transducer tonb | I596_RS17845 | Not Available | Negative | 4416062 - 4416727 | 23768.7 |
| lipopolysaccharide assembly protein lapb | I596_RS17850 | Not Available | Negative | 4416900 - 4418189 | 47585.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | I596_RS17855 | Q9KVX3 | Negative | 4418758 - 4421199 | 89737.9 |
| dna replication/repair protein recf | I596_RS17860 | Q4V0S6 | Negative | 4421286 - 4422359 | 39111.7 |
| dna polymerase iii subunit beta | I596_RS17865 | P0A120 | Negative | 4422454 - 4423554 | 40731.2 |
| chromosomal replication initiator protein dnaa | I596_RS17870 | Q3BZT1 | Negative | 4423762 - 4425087 | 49540.3 |
| 50s ribosomal protein l34 | I596_RS17875 | B2FPA7 | Positive | 4425342 - 4425482 | 5426.79 |
| ribonuclease p protein component | I596_RS17880 | A1WWE2 | Positive | 4425499 - 4425951 | 16464.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
