Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | I596_RS17690 | Not Available | Positive | 4369173 - 4369943 | 27677.3 |
| class i sam-dependent methyltransferase | I596_RS17695 | Not Available | Negative | 4369963 - 4370676 | 26447.5 |
| hypothetical protein | I596_RS17700 | Not Available | Negative | 4370673 - 4372793 | 77911.2 |
| plp-dependent aspartate aminotransferase family protein | I596_RS17705 | Q83A83 | Negative | 4372905 - 4374065 | 41841.7 |
| ubia prenyltransferase family protein | I596_RS17710 | Not Available | Negative | 4374187 - 4375071 | 31365.1 |
| c25 family cysteine peptidase | I596_RS17715 | Not Available | Negative | 4375089 - 4377806 | 99460.8 |
| grx4 family monothiol glutaredoxin | I596_RS17720 | P73056 | Negative | 4378119 - 4379033 | 33020.9 |
| ig-like domain-containing protein | I596_RS17725 | A0A2S4N3N0 | Positive | 4379386 - 4381431 | 73818.7 |
| sgnh/gdsl hydrolase family protein | I596_RS17730 | Not Available | Negative | 4381531 - 4382160 | 22310.5 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | I596_RS17735 | P0A960 | Negative | 4382150 - 4383394 | 44665.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
