Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | I596_RS17450 | Not Available | Positive | 4315003 - 4316019 | 36649.6 |
| dna-binding transcriptional regulator | I596_RS17455 | Not Available | Negative | 4316032 - 4316355 | 12087.9 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS18285 | Not Available | Negative | 4316459 - 4316683 | 8070.73 |
| gamma-glutamyltransferase | I596_RS17460 | O05218 | Negative | 4316779 - 4318473 | 61186.0 |
| abc transporter atp-binding protein | I596_RS17465 | P72477 | Positive | 4318553 - 4319380 | 29900.3 |
| pgpgw domain-containing protein | I596_RS17470 | Not Available | Positive | 4319450 - 4319815 | 13670.1 |
| tonb-dependent receptor | I596_RS17475 | P38370 | Negative | 4319861 - 4322938 | 112902.0 |
| helix-turn-helix domain-containing protein | I596_RS17480 | Not Available | Negative | 4322967 - 4323917 | 34207.9 |
| winged helix-turn-helix domain-containing protein | I596_RS17485 | Not Available | Negative | 4324048 - 4326255 | 79515.4 |
| aec family transporter | I596_RS17490 | O27435 | Negative | 4326390 - 4327295 | 31667.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
