Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS17400 | Not Available | Negative | 4304186 - 4305061 | 30582.8 |
| ferrochelatase | I596_RS17405 | Q5QVZ8 | Positive | 4305262 - 4306269 | 36954.7 |
| alpha/beta fold hydrolase | I596_RS17410 | A2BGU9 | Positive | 4306266 - 4307135 | 31138.4 |
| m48 family metallopeptidase | I596_RS17415 | Not Available | Negative | 4307153 - 4307929 | 29331.5 |
| recombination-associated protein rdgc | I596_RS17420 | Q4UNZ6 | Negative | 4307957 - 4308874 | 34371.1 |
| trna 2-thiocytidine(32) synthetase ttca | I596_RS17425 | B2FU61 | Negative | 4308969 - 4309823 | 31758.3 |
| ydch family protein | I596_RS17430 | Not Available | Positive | 4309943 - 4310161 | 8446.35 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | I596_RS17435 | Q8P3E3 | Negative | 4310181 - 4312748 | 95661.8 |
| hypothetical protein | I596_RS17440 | Not Available | Negative | 4312800 - 4313699 | 31977.8 |
| 5'-nucleotidase, lipoprotein e(p4) family | I596_RS17445 | P26093 | Negative | 4313979 - 4314884 | 32863.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
