Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | I596_RS17350 | Not Available | Positive | 4292475 - 4293509 | 36581.3 |
| choice-of-anchor d domain-containing protein | I596_RS17355 | Not Available | Positive | 4293720 - 4296071 | 81050.5 |
| glycine--trna ligase subunit beta | I596_RS17360 | B0RYX3 | Negative | 4296354 - 4298477 | 75955.0 |
| glycine--trna ligase subunit alpha | I596_RS17365 | Q4UP07 | Negative | 4298477 - 4299379 | 34028.2 |
| gspe/pule family protein | I596_RS17370 | Q6FA79 | Positive | 4299453 - 4301273 | 67563.1 |
| hypothetical protein | I596_RS17375 | Not Available | Negative | 4301429 - 4301653 | 8127.77 |
| twin-arginine translocase subunit tatc | I596_RS17380 | P54085 | Negative | 4301971 - 4302732 | 27180.5 |
| sec-independent protein translocase protein tatb | I596_RS17385 | Q87B79 | Negative | 4302780 - 4303127 | 12269.6 |
| sec-independent protein translocase subunit tata | I596_RS19180 | Q0K698 | Negative | 4303137 - 4303358 | 8053.67 |
| lipid-binding sylf domain-containing protein | I596_RS17395 | A7A261 | Negative | 4303437 - 4304117 | 23430.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
