Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa disulfide reductase family protein | I596_RS17300 | Q65HX8 | Positive | 4278474 - 4279040 | 20020.2 |
| amp-binding protein | I596_RS17305 | Q9Z3R3 | Positive | 4279173 - 4280732 | 55348.5 |
| nad-dependent epimerase/dehydratase family protein | I596_RS17310 | Q9ZAE8 | Positive | 4280729 - 4281679 | 32573.9 |
| glycosyltransferase family 2 protein | I596_RS17315 | O34319 | Positive | 4281732 - 4282694 | 34522.8 |
| gtra family protein | I596_RS17320 | Not Available | Positive | 4282684 - 4283070 | 14496.3 |
| deoxyribodipyrimidine photo-lyase | I596_RS17325 | A9CJC9 | Positive | 4283076 - 4284491 | 52103.7 |
| hypothetical protein | I596_RS18630 | Not Available | Negative | 4284496 - 4284819 | 11636.6 |
| threonine ammonia-lyase, biosynthetic | I596_RS17335 | P53607 | Negative | 4284844 - 4286370 | 54889.9 |
| s41 family peptidase | I596_RS17340 | Not Available | Positive | 4286493 - 4289795 | 120688.0 |
| winged helix-turn-helix domain-containing protein | I596_RS17345 | Not Available | Positive | 4289929 - 4292322 | 86157.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
