Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nosd domain-containing protein | I596_RS17255 | Not Available | Negative | 4260875 - 4263334 | 83946.9 |
| calx-beta domain-containing protein | I596_RS17260 | Not Available | Negative | 4263430 - 4265184 | 57126.3 |
| rna polymerase sigma factor | I596_RS17265 | Not Available | Positive | 4265401 - 4265976 | 21236.4 |
| serine/threonine-protein kinase | I596_RS17270 | Q9XA16 | Positive | 4265963 - 4267540 | 55030.0 |
| chat domain-containing protein | I596_RS17275 | Not Available | Positive | 4267579 - 4270392 | 98968.9 |
| hypothetical protein | I596_RS19105 | Not Available | Negative | 4271022 - 4271177 | 5372.13 |
| chaperonin groel | I596_RS17280 | Q8RIT7 | Negative | 4271251 - 4272897 | 57645.7 |
| co-chaperone groes | I596_RS17285 | B7J562 | Negative | 4272968 - 4273255 | 10251.5 |
| endonuclease | I596_RS17290 | Q03091 | Positive | 4273574 - 4275796 | 76331.1 |
| protein-disulfide reductase dsbd | I596_RS17295 | Q15ZS2 | Positive | 4276238 - 4278472 | 78192.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
