Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | I596_RS17205 | Not Available | Negative | 4243853 - 4246264 | 85171.0 |
| undecaprenyl-diphosphate phosphatase | I596_RS17210 | Q1MMI4 | Negative | 4246311 - 4247099 | 28117.8 |
| type i glutamate--ammonia ligase | I596_RS17215 | P15124 | Positive | 4247355 - 4248764 | 51660.2 |
| hypothetical protein | I596_RS18625 | Not Available | Negative | 4248835 - 4250355 | 55139.2 |
| duf805 domain-containing protein | I596_RS18850 | P64591 | Positive | 4250603 - 4251004 | 13662.1 |
| serine/threonine-protein kinase | I596_RS17230 | Not Available | Negative | 4251208 - 4254105 | 104457.0 |
| ecf-type sigma factor | I596_RS17235 | Not Available | Negative | 4254110 - 4254661 | 20174.3 |
| dpp iv n-terminal domain-containing protein | I596_RS17240 | Not Available | Negative | 4254725 - 4257139 | 87370.2 |
| ecf-type sigma factor | I596_RS17245 | Not Available | Positive | 4257332 - 4257910 | 21107.2 |
| serine/threonine-protein kinase | I596_RS17250 | P65733 | Negative | 4257926 - 4260760 | 98544.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
