Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oapa family protein | I596_RS17160 | Q46798 | Positive | 4222129 - 4223607 | 54113.8 |
| anhydro-n-acetylmuramic acid kinase | I596_RS17165 | Q2P894 | Positive | 4223600 - 4224700 | 37228.3 |
| ampg family muropeptide mfs transporter | I596_RS17170 | P0AE17 | Positive | 4224803 - 4226185 | 48028.1 |
| hypothetical protein | I596_RS18620 | Not Available | Positive | 4226351 - 4226815 | 17154.4 |
| exodeoxyribonuclease iii | I596_RS17175 | Not Available | Negative | 4226895 - 4227695 | 30452.4 |
| glucan abc transporter atp-binding protein/ permease | I596_RS17180 | Q3SP57 | Positive | 4227962 - 4229743 | 63564.5 |
| aaa family atpase | I596_RS17185 | Q1XDU8 | Negative | 4229751 - 4231226 | 53755.2 |
| tetratricopeptide repeat protein | I596_RS17190 | Not Available | Positive | 4231436 - 4233526 | 75732.1 |
| ybhb/ybcl family raf kinase inhibitor-like protein | I596_RS18270 | O58984 | Positive | 4233563 - 4234210 | 23347.3 |
| carboxypeptidase regulatory-like domain-containing protein | I596_RS17200 | Not Available | Negative | 4238735 - 4243732 | 171419.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
