Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | I596_RS01660 | Not Available | Positive | 437136 - 437510 | 13797.8 |
| voc family protein | I596_RS01665 | Not Available | Positive | 437562 - 437939 | 13610.1 |
| hypothetical protein | I596_RS01670 | Not Available | Positive | 438110 - 438499 | 14049.6 |
| lysr family transcriptional regulator argp | I596_RS01675 | P67666 | Negative | 438581 - 439471 | 32527.5 |
| lyse/argo family amino acid transporter | I596_RS01680 | P64904 | Positive | 439581 - 440198 | 21942.5 |
| glxa family transcriptional regulator | I596_RS01685 | Not Available | Negative | 440292 - 441290 | 36170.5 |
| dienelactone hydrolase family protein | I596_RS01690 | Q43914 | Positive | 441383 - 442105 | 25851.7 |
| alpha/beta hydrolase | I596_RS01695 | Q9C942 | Positive | 442322 - 443143 | 29553.5 |
| alpha/beta fold hydrolase | I596_RS01700 | O05691 | Positive | 443270 - 444097 | 29778.4 |
| hypothetical protein | I596_RS01705 | Not Available | Positive | 444188 - 444685 | 17779.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
