Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dutp diphosphatase | I596_RS17110 | A5IEX1 | Positive | 4210201 - 4210716 | 18044.8 |
| phosphomannomutase/phosphoglucomutase | I596_RS17115 | Q02E40 | Positive | 4211144 - 4213459 | 82729.2 |
| duf4124 domain-containing protein | I596_RS17120 | Not Available | Negative | 4213620 - 4214279 | 24471.1 |
| orotate phosphoribosyltransferase | I596_RS17125 | B8GTF1 | Negative | 4214339 - 4214980 | 22642.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4215168 - 4215282 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4215401 - 4218281 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4218463 - 4218538 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4218570 - 4218646 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4218758 - 4220296 | Not Available |
| tyrosine--trna ligase | I596_RS17155 | Q4UPQ9 | Negative | 4220741 - 4221952 | 44518.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
