Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS17065 | Not Available | Negative | 4199474 - 4199848 | 14459.4 |
| 8-amino-7-oxononanoate synthase | I596_RS17070 | A5VXF2 | Negative | 4199845 - 4201014 | 40083.5 |
| nad(p)/fad-dependent oxidoreductase | I596_RS17075 | P00393 | Positive | 4201095 - 4202375 | 46010.5 |
| biotin synthase biob | I596_RS17080 | B2FLM4 | Negative | 4202412 - 4203443 | 37079.5 |
| comf family protein | I596_RS17085 | Not Available | Positive | 4203504 - 4204220 | 25514.4 |
| serine hydrolase | I596_RS17090 | Not Available | Positive | 4204363 - 4205670 | 47382.1 |
| aph(3')-ii family aminoglycoside o-phosphotransferase | I596_RS17095 | P00552 | Negative | 4205744 - 4206535 | 28706.0 |
| 4-hydroxybenzoate octaprenyltransferase | I596_RS18610 | A1U6P5 | Negative | 4206545 - 4207441 | 32911.1 |
| hypothetical protein | I596_RS18845 | Not Available | Positive | 4208016 - 4208381 | 11123.8 |
| fmn-binding glutamate synthase family protein | I596_RS17105 | O34849 | Positive | 4208475 - 4210115 | 59778.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
