Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf817 domain-containing protein | I596_RS17015 | O34535 | Negative | 4183469 - 4184374 | 34340.6 |
| phospholipase a | I596_RS17020 | Q9K0U7 | Negative | 4184556 - 4185647 | 40832.8 |
| duf1566 domain-containing protein | I596_RS17025 | Not Available | Positive | 4185890 - 4188235 | 85660.6 |
| n-acetyltransferase | I596_RS17030 | Not Available | Negative | 4188254 - 4188829 | 20668.8 |
| s8 family serine peptidase | I596_RS19175 | Not Available | Negative | 4188969 - 4192139 | 108072.0 |
| hypothetical protein | I596_RS18840 | Not Available | Negative | 4192259 - 4195243 | 104015.0 |
| lysr family transcriptional regulator | I596_RS17045 | O87883 | Positive | 4195578 - 4196525 | 34359.5 |
| multidrug resistance efflux transporter family protein | I596_RS17050 | O34428 | Negative | 4196778 - 4197755 | 33749.0 |
| malonyl-acp o-methyltransferase bioc | I596_RS17055 | B2IAI0 | Negative | 4197752 - 4198648 | 32736.1 |
| pimeloyl-acp methyl ester esterase bioh | I596_RS17060 | Q4UZP1 | Negative | 4198645 - 4199415 | 26648.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
