Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | I596_RS18260 | Not Available | Positive | 4146428 - 4146712 | 10109.3 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | I596_RS16870 | Not Available | Negative | 4146923 - 4147609 | 24468.2 |
| rna polymerase sigma factor | I596_RS16875 | O53590 | Positive | 4147721 - 4148275 | 20372.1 |
| hypothetical protein | I596_RS16880 | Not Available | Positive | 4148281 - 4149045 | 27108.5 |
| heat repeat domain-containing protein | I596_RS16885 | Not Available | Positive | 4149064 - 4150290 | 43204.6 |
| heat repeat domain-containing protein | I596_RS16890 | Not Available | Positive | 4150428 - 4151414 | 34117.0 |
| luxr family transcriptional regulator | I596_RS16895 | Not Available | Negative | 4151538 - 4152398 | 32411.6 |
| glug motif-containing protein | I596_RS16900 | Not Available | Positive | 4152910 - 4156884 | 131383.0 |
| duf11 domain-containing protein | I596_RS16905 | Not Available | Positive | 4156947 - 4157732 | 27224.3 |
| hypothetical protein | I596_RS16910 | Not Available | Negative | 4157844 - 4159760 | 67049.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
