Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | I596_RS16730 | Not Available | Negative | 4102950 - 4103861 | 33439.4 |
| gntr family transcriptional regulator | I596_RS16735 | P54590 | Negative | 4103883 - 4104272 | 14083.0 |
| nad-dependent epimerase/dehydratase family protein | I596_RS16740 | Not Available | Positive | 4104497 - 4105633 | 40326.2 |
| yoak family protein | I596_RS16745 | Not Available | Negative | 4105659 - 4106378 | 24391.2 |
| amidohydrolase | I596_RS16750 | A0A1I9LN01 | Negative | 4106491 - 4108332 | 66995.5 |
| duf1427 family protein | I596_RS16755 | Not Available | Negative | 4108370 - 4108630 | 8721.73 |
| alpha/beta fold hydrolase | I596_RS16760 | O31158 | Negative | 4108643 - 4109473 | 29867.3 |
| hydrolase | I596_RS16765 | P21367 | Negative | 4109515 - 4110168 | 22957.4 |
| pirin family protein | I596_RS16770 | P46852 | Negative | 4110206 - 4110907 | 25522.0 |
| lysr family transcriptional regulator | I596_RS16775 | Q8XBK9 | Positive | 4111067 - 4112008 | 33813.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
