Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf748 domain-containing protein | I596_RS16585 | Not Available | Positive | 4063346 - 4064419 | 38801.6 |
| res family nad+ phosphorylase | I596_RS16590 | Not Available | Negative | 4064466 - 4065131 | 24746.2 |
| mbca/pars/xre antitoxin family protein | I596_RS16595 | P55587 | Negative | 4065143 - 4065556 | 15293.5 |
| nitronate monooxygenase family protein | I596_RS16600 | Q9HWH9 | Negative | 4065582 - 4066700 | 38266.1 |
| murein l,d-transpeptidase family protein | I596_RS16605 | Not Available | Positive | 4066942 - 4067427 | 17716.8 |
| helix-turn-helix transcriptional regulator | I596_RS16610 | Not Available | Negative | 4067486 - 4067827 | 12409.0 |
| srpbcc family protein | I596_RS16615 | Not Available | Negative | 4067845 - 4068348 | 18864.2 |
| nad(p)-dependent oxidoreductase | I596_RS16620 | P55579 | Negative | 4068656 - 4069645 | 35810.5 |
| syme family type i addiction module toxin | I596_RS16625 | Not Available | Negative | 4069830 - 4070120 | 10499.9 |
| duf72 domain-containing protein | I596_RS16630 | Not Available | Negative | 4070290 - 4071132 | 31046.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
