Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligoribonuclease | I596_RS16535 | Q8PKW8 | Positive | 4051374 - 4051940 | 21425.6 |
| duf885 family protein | I596_RS16540 | Not Available | Negative | 4051974 - 4053758 | 67487.8 |
| hypothetical protein | I596_RS16545 | Not Available | Positive | 4053907 - 4056807 | 104499.0 |
| carotenoid oxygenase family protein | I596_RS16550 | Q53353 | Negative | 4056863 - 4058365 | 55034.4 |
| duf2141 domain-containing protein | I596_RS16555 | Not Available | Negative | 4058402 - 4058815 | 14334.2 |
| sensor histidine kinase | I596_RS16560 | Q795K2 | Positive | 4058998 - 4060122 | 39781.1 |
| response regulator transcription factor | I596_RS16565 | P55184 | Positive | 4060145 - 4060786 | 22867.7 |
| yafy family protein | I596_RS16570 | Not Available | Negative | 4060797 - 4061489 | 25399.8 |
| dj-1/pfpi family protein | I596_RS16575 | O34947 | Negative | 4061713 - 4062339 | 22599.0 |
| hypothetical protein | I596_RS16580 | Not Available | Positive | 4062683 - 4063180 | 16635.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
