Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase msra | I596_RS16490 | P72800 | Negative | 4038702 - 4039343 | 23074.1 |
| pa0069 family radical sam protein | I596_RS16495 | P9WL78 | Positive | 4039503 - 4040609 | 41417.8 |
| ompw family protein | I596_RS16500 | Q8Z7E2 | Positive | 4040849 - 4041466 | 22294.5 |
| duf4197 domain-containing protein | I596_RS16505 | Not Available | Positive | 4041747 - 4042436 | 24055.9 |
| hypothetical protein | I596_RS18240 | Not Available | Negative | 4042720 - 4042920 | 7213.79 |
| exodeoxyribonuclease i | I596_RS16510 | P04995 | Negative | 4043012 - 4044463 | 54402.6 |
| na/pi cotransporter family protein | I596_RS16515 | Q8X5Z7 | Negative | 4044460 - 4046124 | 58761.2 |
| serine/threonine-protein kinase | I596_RS16520 | P54744 | Negative | 4046181 - 4048973 | 102043.0 |
| ecf-type sigma factor | I596_RS16525 | Not Available | Negative | 4048970 - 4049548 | 21260.4 |
| right-handed parallel beta-helix repeat-containing protein | I596_RS16530 | Not Available | Positive | 4049752 - 4051215 | 49852.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
