Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS16440 | Not Available | Negative | 4028197 - 4029144 | 34456.3 |
| hypothetical protein | I596_RS16445 | Not Available | Negative | 4029187 - 4029747 | 20577.4 |
| nad(p)/fad-dependent oxidoreductase | I596_RS16450 | Q6Q873 | Negative | 4030319 - 4031224 | 31196.2 |
| rrf2 family transcriptional regulator | I596_RS16455 | Not Available | Negative | 4031214 - 4031669 | 15960.2 |
| lyttr family dna-binding domain-containing protein | I596_RS16460 | Not Available | Positive | 4031823 - 4032698 | 32764.7 |
| nucleotide pyrophosphohydrolase | I596_RS16465 | Q9QY93 | Positive | 4032823 - 4033173 | 13029.3 |
| duf2075 domain-containing protein | I596_RS16470 | Q12179 | Positive | 4033197 - 4035065 | 70125.5 |
| hypothetical protein | I596_RS19135 | Not Available | Positive | 4035629 - 4035964 | 11847.5 |
| tonb-dependent receptor | I596_RS16480 | P76115 | Negative | 4035930 - 4038059 | 75830.2 |
| peptide-methionine (r)-s-oxide reductase msrb | I596_RS16485 | B2I8Y4 | Negative | 4038280 - 4038705 | 15803.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
