Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | I596_RS16390 | C9XVZ5 | Positive | 4011240 - 4012427 | 41701.1 |
| efflux rnd transporter permease subunit | I596_RS16395 | A9MKX0 | Positive | 4012601 - 4015837 | 115092.0 |
| efflux rnd transporter permease subunit | I596_RS16400 | Q6D2B1 | Positive | 4016675 - 4019839 | 112815.0 |
| glycosyltransferase family 2 protein | I596_RS16405 | Q54435 | Positive | 4020110 - 4020973 | 31860.6 |
| winged helix-turn-helix domain-containing protein | I596_RS16410 | Not Available | Positive | 4021050 - 4023452 | 85238.4 |
| ycf48-related protein | I596_RS16415 | Not Available | Negative | 4023519 - 4024520 | 35095.5 |
| hypothetical protein | I596_RS16420 | Not Available | Positive | 4024843 - 4025829 | 33678.4 |
| hypothetical protein | I596_RS16425 | Not Available | Positive | 4025826 - 4026470 | 22928.2 |
| rna polymerase sigma factor | I596_RS16430 | Not Available | Positive | 4026470 - 4027018 | 19812.8 |
| hypothetical protein | I596_RS16435 | Not Available | Positive | 4027005 - 4028108 | 38256.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
