Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional lysylphosphatidylglycerol flippase/synthetase mprf | I596_RS16340 | C0H3X7 | Positive | 3999925 - 4002480 | 91547.3 |
| virulence factor family protein | I596_RS16345 | Not Available | Positive | 4002484 - 4003941 | 50868.9 |
| atp-binding protein | I596_RS16350 | Q9I4F8 | Negative | 4003984 - 4005372 | 50925.0 |
| response regulator transcription factor | I596_RS16355 | Q9I4F9 | Negative | 4005376 - 4006089 | 26595.7 |
| pepsy domain-containing protein | I596_RS16360 | Not Available | Negative | 4006109 - 4006351 | 9035.1 |
| alkaline phosphatase | I596_RS16365 | P05187 | Negative | 4006476 - 4008185 | 59866.0 |
| lrp/asnc family transcriptional regulator | I596_RS16370 | P42179 | Negative | 4008252 - 4008731 | 17468.1 |
| phenylalanine 4-monooxygenase | I596_RS16375 | Q8XU39 | Positive | 4008858 - 4009748 | 34000.3 |
| voc family protein | I596_RS16380 | Not Available | Positive | 4009766 - 4010224 | 15915.9 |
| gamma carbonic anhydrase family protein | I596_RS16385 | Q9C6B3 | Negative | 4010273 - 4010806 | 18882.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
