Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | I596_RS16290 | Q9KSX0 | Positive | 3985745 - 3986338 | 20787.0 |
| hisa/hisf-related tim barrel protein | I596_RS16295 | Q4UU44 | Positive | 3986335 - 3987072 | 26195.2 |
| imidazole glycerol phosphate synthase subunit hisf | I596_RS16300 | A6VQ74 | Positive | 3987054 - 3987830 | 26906.0 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | I596_RS16305 | Q8EFB6 | Positive | 3987827 - 3988438 | 21605.8 |
| ferritin-like domain-containing protein | I596_RS18230 | Not Available | Positive | 3988590 - 3990572 | 69560.2 |
| s8 family serine peptidase | I596_RS16315 | Q9FLI4 | Negative | 3990645 - 3994106 | 116769.0 |
| winged helix-turn-helix domain-containing protein | I596_RS16320 | Not Available | Positive | 3994313 - 3996751 | 85958.8 |
| hypothetical protein | I596_RS16325 | Not Available | Negative | 3996841 - 3997470 | 23349.2 |
| mannosyltransferase family protein | I596_RS16330 | Not Available | Negative | 3997440 - 3998612 | 42817.2 |
| glycosyltransferase family 2 protein | I596_RS16335 | Not Available | Negative | 3998666 - 3999712 | 38556.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
