Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine deiminase-related protein | I596_RS16240 | Not Available | Positive | 3976325 - 3977239 | 32323.7 |
| type 1 glutamine amidotransferase | I596_RS16245 | Not Available | Negative | 3977267 - 3978013 | 27453.1 |
| amino acid permease | I596_RS16250 | Q797A7 | Positive | 3978140 - 3979597 | 51347.4 |
| duf6265 family protein | I596_RS16255 | Not Available | Negative | 3979669 - 3980127 | 16133.0 |
| helix-turn-helix domain-containing protein | I596_RS16260 | Not Available | Positive | 3980214 - 3980951 | 26157.2 |
| yerc/yecd family trpr-related protein | I596_RS16265 | Not Available | Positive | 3981076 - 3981429 | 12815.3 |
| atp phosphoribosyltransferase | I596_RS16270 | Q8PLH0 | Positive | 3981423 - 3982322 | 31573.6 |
| histidinol dehydrogenase | I596_RS16275 | Q2P3K3 | Positive | 3982319 - 3983638 | 46099.3 |
| histidinol-phosphate transaminase | I596_RS16280 | B4STN8 | Positive | 3983635 - 3984684 | 37077.6 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | I596_RS16285 | B2FPM1 | Positive | 3984681 - 3985748 | 38448.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
