Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | I596_RS16190 | Q55702 | Negative | 3965421 - 3966293 | 29744.9 |
| biosynthetic arginine decarboxylase | I596_RS16195 | Q8PFQ5 | Negative | 3966335 - 3968221 | 68787.8 |
| polyamine aminopropyltransferase | I596_RS16200 | Q4UPN0 | Positive | 3968390 - 3969247 | 31877.0 |
| hypothetical protein | I596_RS18825 | Not Available | Negative | 3969338 - 3970093 | 27023.5 |
| aminopeptidase n | I596_RS16210 | P37893 | Negative | 3970158 - 3972794 | 96640.8 |
| pyridoxal-phosphate dependent enzyme | I596_RS16215 | A1B8Z2 | Positive | 3972967 - 3973923 | 32879.7 |
| duf2214 family protein | I596_RS16220 | Not Available | Positive | 3973937 - 3974395 | 17017.3 |
| dmt family transporter | I596_RS16225 | P0ABT9 | Negative | 3974383 - 3975261 | 31279.7 |
| ketosteroid isomerase-related protein | I596_RS16230 | Not Available | Positive | 3975331 - 3975735 | 15128.7 |
| dna-3-methyladenine glycosylase i | I596_RS16235 | P05100 | Positive | 3975744 - 3976328 | 21721.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
