Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | I596_RS01570 | Not Available | Positive | 420718 - 421893 | 42037.7 |
| ef-p lysine aminoacylase epma | I596_RS01575 | Q9KNS6 | Negative | 421907 - 422866 | 35287.1 |
| alkyl hydroperoxide reductase subunit c | I596_RS01580 | Q02UU0 | Positive | 423007 - 423570 | 20689.6 |
| alkyl hydroperoxide reductase subunit f | I596_RS01585 | O06465 | Positive | 423762 - 425336 | 56368.8 |
| hypothetical protein | I596_RS18345 | Not Available | Positive | 426107 - 426397 | 10315.9 |
| duf2200 domain-containing protein | I596_RS01590 | Not Available | Positive | 426492 - 426842 | 13490.4 |
| voc family protein | I596_RS01595 | Not Available | Positive | 426964 - 427314 | 13541.9 |
| doxx family protein | I596_RS01600 | Not Available | Positive | 427413 - 427784 | 13454.2 |
| nad(+)--rifampin adp-ribosyltransferase | I596_RS01605 | Not Available | Positive | 428195 - 428596 | 14796.2 |
| nuclear transport factor 2 family protein | I596_RS01610 | Not Available | Positive | 428762 - 429262 | 18349.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
