Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | I596_RS15990 | P27303 | Negative | 3919618 - 3920805 | 42036.2 |
| efflux transporter outer membrane subunit | I596_RS15995 | Q83P87 | Negative | 3920834 - 3922282 | 51041.1 |
| marr family winged helix-turn-helix transcriptional regulator | I596_RS16000 | Not Available | Negative | 3922306 - 3922764 | 16806.4 |
| ykgj family cysteine cluster protein | I596_RS16005 | Q9KT48 | Negative | 3922941 - 3923195 | 8653.59 |
| shikimate dehydrogenase | I596_RS16010 | Q2P8K0 | Negative | 3923199 - 3924020 | 27400.6 |
| porphobilinogen synthase | I596_RS16015 | Q59643 | Negative | 3924017 - 3925012 | 35967.2 |
| ggdef domain-containing response regulator | I596_RS16020 | Not Available | Positive | 3925331 - 3927916 | 93830.5 |
| abc transporter atp-binding protein | I596_RS16025 | P33116 | Negative | 3927907 - 3929793 | 69629.3 |
| hypothetical protein | I596_RS16030 | Not Available | Positive | 3930077 - 3930535 | 16804.5 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | I596_RS16035 | Q4UP54 | Positive | 3930626 - 3931276 | 23114.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
