Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s8 family serine peptidase | I596_RS15940 | P54683 | Positive | 3903439 - 3906927 | 119935.0 |
| ecf-type sigma factor | I596_RS18815 | Not Available | Positive | 3907086 - 3907649 | 21348.6 |
| serine/threonine-protein kinase | I596_RS15950 | Q8G6P9 | Positive | 3907646 - 3909838 | 78850.6 |
| hypothetical protein | I596_RS15955 | Not Available | Positive | 3909917 - 3910243 | 11614.4 |
| pseudouridine synthase | I596_RS15960 | Q8ZGM2 | Negative | 3910260 - 3910964 | 25335.6 |
| class i sam-dependent methyltransferase | I596_RS15965 | A1S321 | Negative | 3910961 - 3912028 | 37888.2 |
| hypothetical protein | I596_RS15970 | Not Available | Negative | 3912105 - 3913559 | 52823.0 |
| serine/threonine-protein kinase | I596_RS15975 | Q8R9T6 | Positive | 3913798 - 3915807 | 69501.9 |
| hypothetical protein | I596_RS15980 | Not Available | Positive | 3915832 - 3918009 | 78510.6 |
| dha2 family efflux mfs transporter permease subunit | I596_RS15985 | P44927 | Negative | 3918040 - 3919590 | 55811.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
