Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | I596_RS15740 | B8GN14 | Negative | 3861167 - 3862630 | 52966.9 |
| phosphatase pap2 family protein | I596_RS15745 | Not Available | Positive | 3862805 - 3863440 | 22650.4 |
| m12 family metallo-peptidase | I596_RS18215 | Not Available | Positive | 3863581 - 3865137 | 56268.2 |
| hypothetical protein | I596_RS18575 | Not Available | Positive | 3865124 - 3866569 | 52986.1 |
| response regulator transcription factor | I596_RS15760 | P0AE89 | Positive | 3866642 - 3867346 | 25805.1 |
| atp-binding protein | I596_RS15765 | P0AE84 | Positive | 3867348 - 3868745 | 51228.6 |
| alpha/beta fold hydrolase | I596_RS15770 | B1M5I5 | Positive | 3868792 - 3869823 | 37341.8 |
| atp-binding protein | I596_RS15775 | Not Available | Positive | 3869825 - 3871132 | 46497.5 |
| response regulator transcription factor | I596_RS15780 | Q53228 | Positive | 3871125 - 3871682 | 20089.2 |
| hypothetical protein | I596_RS18810 | Not Available | Positive | 3872003 - 3872386 | 12779.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
