Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | I596_RS15690 | Q9I2Q2 | Positive | 3850963 - 3853701 | 100607.0 |
| hypothetical protein | I596_RS15695 | Not Available | Positive | 3853742 - 3854320 | 19866.6 |
| tpm domain-containing protein | I596_RS15700 | Not Available | Negative | 3854401 - 3854889 | 18188.7 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS19265 | Not Available | Negative | 3855341 - 3855814 | 16898.4 |
| lema family protein | I596_RS15710 | Not Available | Negative | 3855826 - 3856434 | 22087.3 |
| lipid-a-disaccharide synthase n-terminal domain-containing protein | I596_RS15715 | Not Available | Negative | 3856545 - 3856853 | 11919.7 |
| sulfate adenylyltransferase subunit cysn | I596_RS15720 | P72339 | Negative | 3857040 - 3858938 | 68134.4 |
| sulfate adenylyltransferase subunit cysd | I596_RS15725 | Q9A881 | Negative | 3858938 - 3859840 | 34191.0 |
| terc family protein | I596_RS15730 | P43932 | Negative | 3859920 - 3860663 | 26398.0 |
| diacylglycerol kinase | I596_RS15735 | P0ABN3 | Negative | 3860774 - 3861145 | 13454.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
