Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | I596_RS01520 | Not Available | Positive | 403440 - 405842 | 84243.8 |
| adop family duplicated permease | I596_RS01525 | Q02MI4 | Positive | 406400 - 408817 | 85148.4 |
| abc transporter atp-binding protein | I596_RS01530 | O34979 | Positive | 408999 - 409691 | 25642.9 |
| abc transporter permease | I596_RS01535 | Not Available | Positive | 409688 - 412084 | 83555.6 |
| sigma-54 dependent transcriptional regulator | I596_RS01540 | Q9APD9 | Positive | 412192 - 413595 | 50637.9 |
| hypothetical protein | I596_RS01545 | Not Available | Negative | 413639 - 414316 | 25468.2 |
| pas domain-containing sensor histidine kinase | I596_RS01550 | P0AFB6 | Positive | 414496 - 415839 | 48610.6 |
| hypothetical protein | I596_RS01555 | Not Available | Positive | 415829 - 417085 | 45000.2 |
| duf2238 domain-containing protein | I596_RS01560 | Not Available | Positive | 417282 - 417956 | 24450.8 |
| adop family duplicated permease | I596_RS01565 | Not Available | Negative | 418007 - 420421 | 83205.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
