Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-glutamate dehydrogenase domain-containing protein | I596_RS15540 | Q9HZE0 | Positive | 3810154 - 3815094 | 182904.0 |
| nad kinase | I596_RS15545 | Q9PBQ0 | Positive | 3815091 - 3815852 | 27876.6 |
| s8 family serine peptidase | I596_RS15550 | Not Available | Positive | 3815833 - 3818103 | 78476.5 |
| pitrilysin family protein | I596_RS15555 | O32965 | Negative | 3818167 - 3819603 | 49612.0 |
| pitrilysin family protein | I596_RS15560 | O25656 | Negative | 3819600 - 3820973 | 49811.6 |
| pdz domain-containing protein | I596_RS15565 | Not Available | Negative | 3821146 - 3821859 | 24624.1 |
| cobalamin biosynthesis protein | I596_RS15570 | Not Available | Negative | 3821862 - 3822743 | 31911.8 |
| nad(+) diphosphatase | I596_RS15575 | Q9DCN1 | Negative | 3822824 - 3823783 | 35598.0 |
| iron-sulfur cluster insertion protein erpa | I596_RS15580 | B2FJT4 | Negative | 3823780 - 3824148 | 13131.3 |
| polymer-forming cytoskeletal protein | I596_RS15585 | Not Available | Negative | 3824205 - 3824618 | 14087.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
