Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | I596_RS15490 | Q8PQN3 | Positive | 3798959 - 3799498 | 19675.9 |
| peptidoglycan -binding protein | I596_RS15495 | P46827 | Negative | 3799513 - 3800574 | 38241.8 |
| flagellar motor protein mota | I596_RS15500 | Not Available | Negative | 3800571 - 3801653 | 38662.8 |
| hypothetical protein | I596_RS15505 | Not Available | Positive | 3802033 - 3802536 | 17082.4 |
| hypothetical protein | I596_RS15510 | Not Available | Positive | 3802703 - 3803782 | 38706.9 |
| fibronectin type iii domain-containing protein | I596_RS15515 | Not Available | Positive | 3803782 - 3804165 | 13949.6 |
| hypothetical protein | I596_RS15520 | Not Available | Positive | 3804366 - 3804938 | 19043.2 |
| hypothetical protein | I596_RS15525 | Not Available | Positive | 3804946 - 3806091 | 41124.6 |
| hypothetical protein | I596_RS15530 | Not Available | Positive | 3806088 - 3806471 | 13661.2 |
| duf2126 domain-containing protein | I596_RS15535 | Not Available | Negative | 3806520 - 3809831 | 122297.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
