Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s41 family peptidase | I596_RS15445 | Not Available | Negative | 3779800 - 3780933 | 39503.2 |
| chat domain-containing tetratricopeptide repeat protein | I596_RS15450 | Not Available | Positive | 3781179 - 3784268 | 107886.0 |
| hypothetical protein | I596_RS15455 | Not Available | Positive | 3784265 - 3784831 | 19921.8 |
| hypothetical protein | I596_RS15460 | Not Available | Positive | 3785059 - 3785802 | 26466.9 |
| ig-like domain-containing protein | I596_RS15465 | Not Available | Positive | 3785942 - 3789949 | 134523.0 |
| dead/deah box helicase | I596_RS15470 | P94593 | Negative | 3790029 - 3793394 | 122068.0 |
| nadp-dependent isocitrate dehydrogenase | I596_RS15475 | Q9ZN36 | Positive | 3793588 - 3794847 | 45439.4 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | I596_RS15480 | Q3BNH4 | Positive | 3795015 - 3796754 | 65726.5 |
| duf1328 family protein | I596_RS18210 | Not Available | Negative | 3797598 - 3797765 | 5802.6 |
| class i sam-dependent methyltransferase | I596_RS15485 | Not Available | Positive | 3798020 - 3798907 | 31158.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
