Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smp-30/gluconolactonase/lre family protein | I596_RS19060 | Not Available | Positive | 3768743 - 3769609 | 30017.6 |
| rrna maturation rnase ybey | I596_RS15400 | B4SQK2 | Positive | 3769617 - 3770087 | 17009.5 |
| hypothetical protein | I596_RS15405 | Not Available | Positive | 3770271 - 3770987 | 26034.9 |
| glxa family transcriptional regulator | I596_RS15410 | Q9HTH5 | Positive | 3771466 - 3772425 | 34957.3 |
| dj-1/pfpi family protein | I596_RS15415 | P49322 | Positive | 3772607 - 3773623 | 36267.2 |
| m23 family metallopeptidase | I596_RS15420 | Not Available | Positive | 3773697 - 3774890 | 41908.6 |
| lyttr family dna-binding domain-containing protein | I596_RS15425 | Not Available | Negative | 3775266 - 3776084 | 29552.7 |
| nuclear transport factor 2 family protein | I596_RS15430 | Not Available | Positive | 3776208 - 3776714 | 18346.8 |
| sialidase family protein | I596_RS15435 | Not Available | Positive | 3777045 - 3779153 | 77096.9 |
| hypothetical protein | I596_RS15440 | Not Available | Negative | 3779236 - 3779565 | 12132.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
