Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exem/nuch family extracellular endonuclease | I596_RS15295 | Not Available | Negative | 3731349 - 3736727 | 181281.0 |
| hypothetical protein | I596_RS15300 | Not Available | Positive | 3737487 - 3737762 | 9816.23 |
| barstar family protein | I596_RS15305 | Not Available | Negative | 3737866 - 3738279 | 14578.6 |
| ribonuclease domain-containing protein | I596_RS15310 | P00650 | Negative | 3738276 - 3738695 | 14917.9 |
| ydei family protein | I596_RS15315 | Not Available | Positive | 3738814 - 3739413 | 22356.1 |
| glycine zipper 2tm domain-containing protein | I596_RS15320 | Not Available | Positive | 3739521 - 3740132 | 21130.1 |
| gh36-type glycosyl hydrolase domain-containing protein | I596_RS15325 | P20471 | Positive | 3740444 - 3748924 | 310965.0 |
| lamin tail domain-containing protein | I596_RS19055 | Q9FN03 | Negative | 3749363 - 3754975 | 189418.0 |
| delta-60 repeat domain-containing protein | I596_RS18570 | Not Available | Positive | 3755313 - 3757496 | 72454.1 |
| hypothetical protein | I596_RS15340 | Not Available | Negative | 3757537 - 3758424 | 31785.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
