Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium and cobalt transport protein cora | I596_RS15195 | Not Available | Positive | 3706079 - 3707101 | 38282.1 |
| carbon starvation csta family protein | I596_RS15200 | P15078 | Positive | 3707307 - 3709370 | 73307.5 |
| ybdd/yjix family protein | I596_RS15205 | Not Available | Positive | 3709457 - 3709639 | 6882.35 |
| gnat family n-acetyltransferase | I596_RS19050 | P31668 | Positive | 3709824 - 3710321 | 18496.2 |
| srpbcc family protein | I596_RS15215 | Not Available | Positive | 3710550 - 3710966 | 15191.1 |
| prolyl oligopeptidase family serine peptidase | I596_RS15220 | Not Available | Positive | 3710999 - 3713506 | 91678.4 |
| duf1631 domain-containing protein | I596_RS15225 | Not Available | Negative | 3713759 - 3716143 | 87302.5 |
| trm112 family protein | I596_RS15230 | Not Available | Negative | 3716364 - 3716633 | 9337.35 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | I596_RS15235 | P72157 | Positive | 3716733 - 3717242 | 17632.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | I596_RS15240 | P72158 | Positive | 3717247 - 3718380 | 40360.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
