Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | I596_RS15045 | Not Available | Positive | 3673736 - 3674329 | 22140.8 |
| duf6164 family protein | I596_RS15050 | Not Available | Negative | 3674343 - 3674711 | 13529.5 |
| mgtc/sapb family protein | I596_RS15055 | Q55026 | Negative | 3674715 - 3675197 | 16782.1 |
| pseudouridine synthase | I596_RS15060 | P44782 | Positive | 3675359 - 3676279 | 34019.2 |
| hypothetical protein | I596_RS15065 | Not Available | Positive | 3676530 - 3677351 | 28228.3 |
| cold-shock protein | I596_RS15070 | Not Available | Positive | 3677631 - 3677840 | 7632.07 |
| rna-binding protein | I596_RS15075 | Not Available | Positive | 3677915 - 3678166 | 9154.95 |
| rdd family protein | I596_RS15080 | Not Available | Positive | 3678260 - 3678730 | 17172.0 |
| lps export abc transporter permease lptg | I596_RS15085 | P0ADC7 | Negative | 3678756 - 3679859 | 39833.7 |
| lps export abc transporter permease lptf | I596_RS15090 | Not Available | Negative | 3679856 - 3680971 | 40728.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
