Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl aminopeptidase | I596_RS14995 | Q87DF8 | Negative | 3664765 - 3665724 | 36029.5 |
| Trna-pro | Not Available | Not Available | Positive | 3665787 - 3665863 | Not Available |
| merr family transcriptional regulator | I596_RS15005 | Not Available | Negative | 3665898 - 3666254 | 14004.0 |
| integration host factor subunit alpha | I596_RS15010 | P0A0U0 | Negative | 3666232 - 3666534 | 11508.8 |
| phenylalanine--trna ligase subunit beta | I596_RS15015 | Q4UW52 | Negative | 3666536 - 3668911 | 84385.3 |
| phenylalanine--trna ligase subunit alpha | I596_RS15020 | Q3BRU1 | Negative | 3668918 - 3669913 | 37147.6 |
| 50s ribosomal protein l20 | I596_RS15025 | B8GRI3 | Negative | 3670037 - 3670396 | 13546.9 |
| 50s ribosomal protein l35 | I596_RS15030 | P66282 | Negative | 3670410 - 3670607 | 7391.19 |
| translation initiation factor if-3 | I596_RS15035 | Q8P7Z3 | Negative | 3670855 - 3671379 | 19978.6 |
| threonine--trna ligase | I596_RS15040 | B2FN79 | Negative | 3671424 - 3673328 | 71529.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
