Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | I596_RS14945 | Not Available | Negative | 3652942 - 3653838 | 30942.9 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | I596_RS14950 | P08192 | Negative | 3653904 - 3655187 | 44377.3 |
| trna guanosine(34) transglycosylase tgt | I596_RS14955 | B0RRR1 | Negative | 3655184 - 3656317 | 41690.9 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | I596_RS14960 | Q8PJL6 | Negative | 3656314 - 3657351 | 38018.1 |
| response regulator transcription factor | I596_RS14965 | O34723 | Negative | 3657426 - 3658028 | 21785.5 |
| sensor histidine kinase | I596_RS14970 | Not Available | Negative | 3658120 - 3659337 | 44211.4 |
| cia30 family protein | I596_RS14975 | Not Available | Negative | 3659334 - 3661196 | 64598.7 |
| abc transporter permease | I596_RS14980 | Not Available | Negative | 3661222 - 3661989 | 26997.4 |
| abc transporter atp-binding protein | I596_RS14985 | O07016 | Negative | 3661986 - 3662882 | 31949.0 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | I596_RS14990 | Q7SI94 | Positive | 3663195 - 3664703 | 54413.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
