Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thif family adenylyltransferase | I596_RS14845 | Q46927 | Negative | 3633217 - 3634041 | 29161.3 |
| duf6116 family protein | I596_RS14850 | Not Available | Positive | 3634146 - 3634349 | 7573.68 |
| hypothetical protein | I596_RS14855 | Not Available | Positive | 3634353 - 3634739 | 13604.6 |
| duf962 domain-containing protein | I596_RS14860 | Not Available | Negative | 3634841 - 3635143 | 11656.3 |
| nadh:flavin oxidoreductase/nadh oxidase | I596_RS14865 | Q928C2 | Negative | 3635212 - 3636276 | 37363.8 |
| alpha/beta fold hydrolase | I596_RS14870 | Not Available | Negative | 3636291 - 3637178 | 31517.8 |
| cold-shock protein | I596_RS14875 | Not Available | Negative | 3637327 - 3637536 | 7678.04 |
| hypothetical protein | I596_RS14880 | Not Available | Negative | 3637921 - 3639054 | 39231.9 |
| duf2127 domain-containing protein | I596_RS14885 | Not Available | Negative | 3639051 - 3639539 | 17473.6 |
| winged helix-turn-helix domain-containing protein | I596_RS14890 | P75843 | Negative | 3639536 - 3640798 | 47884.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
