Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, hydrophobic membrane anchor protein | I596_RS14800 | Q1RHB6 | Negative | 3623323 - 3623715 | 13850.3 |
| succinate dehydrogenase, cytochrome b556 subunit | I596_RS14805 | Q92J99 | Negative | 3623712 - 3624107 | 14009.3 |
| succinate dehydrogenase assembly factor 4 | I596_RS18180 | Not Available | Negative | 3624178 - 3624363 | 6650.65 |
| folate-binding protein ygfz | I596_RS14810 | B5XUE6 | Positive | 3624332 - 3625297 | 34619.4 |
| cell wall hydrolase | I596_RS14815 | Not Available | Positive | 3625643 - 3626080 | 16218.4 |
| glycine zipper 2tm domain-containing protein | I596_RS19235 | Not Available | Negative | 3626198 - 3626560 | 12459.6 |
| magnesium transporter | I596_RS14825 | Not Available | Positive | 3626827 - 3628059 | 43303.6 |
| winged helix-turn-helix domain-containing protein | I596_RS14830 | Not Available | Positive | 3628103 - 3630562 | 87287.5 |
| hypothetical protein | I596_RS14835 | Not Available | Positive | 3630739 - 3632310 | 53710.1 |
| tatd family hydrolase | I596_RS14840 | P44500 | Positive | 3632437 - 3633201 | 27721.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
