Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein pqqb | I596_RS14710 | A1K4P9 | Negative | 3602243 - 3603157 | 32738.2 |
| pyrroloquinoline quinone precursor peptide pqqa | I596_RS18535 | Not Available | Negative | 3603209 - 3603406 | 7475.08 |
| prolyl aminopeptidase | I596_RS14715 | Q9PD69 | Positive | 3603490 - 3604455 | 35233.0 |
| atp-binding protein | I596_RS14720 | P27668 | Positive | 3604452 - 3605810 | 48773.9 |
| response regulator transcription factor | I596_RS14725 | P0AED5 | Positive | 3605807 - 3606448 | 23115.9 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | I596_RS14730 | B0RVK6 | Negative | 3606491 - 3607939 | 52819.6 |
| dtdp-4-dehydrorhamnose reductase | I596_RS14735 | Q2SYI1 | Negative | 3607954 - 3608886 | 32767.8 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | I596_RS14740 | Q9HU21 | Negative | 3608883 - 3609440 | 20538.2 |
| glucose-1-phosphate thymidylyltransferase rfba | I596_RS14745 | B0RVK9 | Negative | 3609437 - 3610324 | 32815.3 |
| lipid a export permease/atp-binding protein msba | I596_RS14750 | Q3J7R8 | Negative | 3610395 - 3612170 | 63737.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
