Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease iii | I596_RS00110 | O26314 | Negative | 36880 - 37650 | 28813.4 |
| hypothetical protein | I596_RS00115 | Not Available | Positive | 38004 - 39299 | 46798.6 |
| hypothetical protein | I596_RS00120 | Not Available | Positive | 39416 - 40462 | 35070.8 |
| low-specificity l-threonine aldolase | I596_RS00125 | P58319 | Positive | 40887 - 41906 | 35573.9 |
| m3 family metallopeptidase | I596_RS00130 | P27298 | Negative | 41888 - 43930 | 75121.7 |
| spor domain-containing protein | I596_RS00135 | Not Available | Negative | 43971 - 44642 | 24694.6 |
| type iii pantothenate kinase | I596_RS00140 | Q4UPF9 | Negative | 44718 - 45473 | 25743.0 |
| biotin--[acetyl-coa-carboxylase] ligase | I596_RS00145 | P37416 | Negative | 45470 - 46453 | 33779.8 |
| hypothetical protein | I596_RS00150 | Not Available | Positive | 46722 - 47138 | 13632.1 |
| zinc-dependent peptidase | I596_RS00155 | A7MJM0 | Positive | 47191 - 47937 | 27517.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
