Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tmem175 family protein | I596_RS14660 | E4TN31 | Negative | 3589955 - 3590677 | 25651.6 |
| gaf domain-containing protein | I596_RS14665 | O34553 | Positive | 3590748 - 3591233 | 17212.4 |
| tfox/sxy family protein | I596_RS14670 | Not Available | Positive | 3591262 - 3591675 | 14645.0 |
| 2-oxoglutarate dehydrogenase e1 component | I596_RS14675 | P20707 | Positive | 3592124 - 3595012 | 106000.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | I596_RS14680 | Q9I3D2 | Positive | 3595085 - 3596302 | 42888.6 |
| dihydrolipoyl dehydrogenase | I596_RS14685 | P14218 | Positive | 3596449 - 3597873 | 50085.6 |
| s9 family peptidase | I596_RS14690 | P34422 | Negative | 3597952 - 3599952 | 73286.0 |
| pyrroloquinoline quinone biosynthesis protein pqqe | I596_RS14695 | Q608P0 | Negative | 3600140 - 3601261 | 41933.1 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | I596_RS14700 | C1DEW6 | Negative | 3601261 - 3601533 | 10247.2 |
| pyrroloquinoline-quinone synthase pqqc | I596_RS14705 | Q1IG47 | Negative | 3601530 - 3602246 | 27046.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
