Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme a synthase | I596_RS14515 | Not Available | Positive | 3554322 - 3555458 | 40509.8 |
| heme o synthase | I596_RS14520 | B4SHI1 | Positive | 3555496 - 3556398 | 32391.7 |
| dps family protein | I596_RS14525 | P73321 | Negative | 3556438 - 3556905 | 17511.8 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS14530 | P43329 | Positive | 3557166 - 3561103 | 143313.0 |
| hypothetical protein | I596_RS14535 | Not Available | Negative | 3561153 - 3561533 | 14228.9 |
| hypothetical protein | I596_RS14540 | Not Available | Positive | 3562008 - 3562853 | 30032.6 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | I596_RS14545 | P0AG22 | Positive | 3562947 - 3565082 | 78689.7 |
| serine/threonine-protein kinase | I596_RS18170 | Not Available | Positive | 3565163 - 3567697 | 90793.9 |
| nrde family protein | I596_RS14555 | Not Available | Positive | 3567707 - 3568489 | 27959.3 |
| hypothetical protein | I596_RS14560 | Not Available | Negative | 3568556 - 3569380 | 29969.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
