Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS14465 | Not Available | Negative | 3543717 - 3543926 | 7276.75 |
| alpha/beta fold hydrolase | I596_RS14470 | Not Available | Negative | 3543923 - 3544381 | 16414.1 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | I596_RS14475 | O52485 | Negative | 3544513 - 3547662 | 113060.0 |
| cytochrome c oxidase subunit ii | I596_RS14480 | Q1RI44 | Positive | 3548497 - 3549372 | 31971.8 |
| cytochrome c oxidase subunit i | I596_RS14485 | P31833 | Positive | 3549413 - 3551041 | 60300.6 |
| cytochrome c oxidase assembly protein | I596_RS14490 | C3MHJ5 | Positive | 3551220 - 3551825 | 21784.1 |
| cytochrome c oxidase subunit 3 | I596_RS14495 | P92514 | Positive | 3551838 - 3552719 | 32686.9 |
| twin transmembrane helix small protein | I596_RS14500 | Not Available | Negative | 3552768 - 3552974 | 7234.4 |
| surf1 family protein | I596_RS14505 | Not Available | Positive | 3553032 - 3553751 | 26499.8 |
| hypothetical protein | I596_RS14510 | Not Available | Positive | 3553748 - 3554320 | 20643.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
