Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | I596_RS14415 | Q98C38 | Negative | 3535285 - 3536457 | 40413.7 |
| malate dehydrogenase | I596_RS14420 | B3PHI3 | Negative | 3536605 - 3537591 | 35106.9 |
| glutaredoxin family protein | I596_RS14425 | Not Available | Negative | 3537626 - 3538003 | 13265.2 |
| pyridoxal phosphate-dependent aminotransferase | I596_RS14430 | A3PMF8 | Negative | 3538006 - 3539202 | 43046.0 |
| glsb/yeaq/ymge family stress response membrane protein | I596_RS14435 | P64487 | Positive | 3539552 - 3539821 | 9302.93 |
| peptidylprolyl isomerase | I596_RS14440 | O66105 | Negative | 3539882 - 3540403 | 18279.7 |
| hypothetical protein | I596_RS14445 | Not Available | Negative | 3540559 - 3540978 | 14652.8 |
| m48 family metallopeptidase | I596_RS14450 | Not Available | Positive | 3541288 - 3541953 | 23998.2 |
| duf1190 domain-containing protein | I596_RS14455 | A8APS2 | Positive | 3542017 - 3542547 | 18245.3 |
| glutathionylspermidine synthase family protein | I596_RS14460 | P33222 | Positive | 3542547 - 3543728 | 43891.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
