Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl synthase | I596_RS14365 | B2FUS8 | Negative | 3527354 - 3528334 | 36350.8 |
| lipoyl(octanoyl) transferase lipb | I596_RS14370 | B0RNP8 | Negative | 3528331 - 3529026 | 24926.0 |
| duf493 family protein | I596_RS14375 | Q8PPM0 | Negative | 3529014 - 3529304 | 10466.3 |
| d-alanyl-d-alanine carboxypeptidase family protein | I596_RS14380 | P0AEB4 | Negative | 3529307 - 3530614 | 46578.6 |
| septal ring lytic transglycosylase rlpa family protein | I596_RS14385 | Q9KTF4 | Negative | 3530684 - 3531601 | 33214.4 |
| lytic murein transglycosylase b | I596_RS14390 | P41052 | Negative | 3531601 - 3532530 | 34591.9 |
| energy transducer tonb | I596_RS14395 | Not Available | Negative | 3532699 - 3533937 | 43408.2 |
| hypothetical protein | I596_RS14400 | Not Available | Positive | 3534080 - 3534394 | 11159.2 |
| hypothetical protein | I596_RS14405 | Not Available | Positive | 3534405 - 3534803 | 14056.2 |
| hypothetical protein | I596_RS14410 | Not Available | Positive | 3534800 - 3535150 | 12309.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
