Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS19130 | Not Available | Positive | 3513395 - 3513805 | 14439.1 |
| bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein | I596_RS14320 | Not Available | Positive | 3513813 - 3516215 | 85096.3 |
| fha domain-containing protein | I596_RS14325 | Not Available | Positive | 3516238 - 3517041 | 27137.8 |
| carboxylating nicotinate-nucleotide diphosphorylase | I596_RS14330 | P30819 | Negative | 3517076 - 3517933 | 29779.7 |
| s9 family peptidase | I596_RS14335 | B2RIT0 | Negative | 3517947 - 3519998 | 75115.9 |
| opt family oligopeptide transporter | I596_RS14340 | P44016 | Negative | 3520104 - 3522038 | 65864.4 |
| pseudouridine synthase | I596_RS14345 | Q1RJR2 | Negative | 3522137 - 3522898 | 27046.4 |
| tetraacyldisaccharide 4'-kinase | I596_RS14350 | Q60B49 | Negative | 3522895 - 3523878 | 34926.3 |
| dtdp-glucose 4,6-dehydratase | I596_RS14355 | B0RVL0 | Negative | 3523895 - 3524953 | 38847.9 |
| carboxy terminal-processing peptidase | I596_RS14360 | P23865 | Negative | 3525074 - 3527305 | 82510.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
